Category / open access

Call for Papers: Machine Learning in Medical Diagnosis and Prognosis

This is a call for papers for the Special Session on Machine Learning in Medical Diagnosis and Prognosis at IEEE CIBCB 2017.

The IEEE International Conference on Computational Intelligence in Bioinformatics and Computational Biology (IEEE CIBCB 2017) will be held at the INNSIDE Hotel, Manchester from August 23rd to 25th, 2017.

This annual conference has become a major technical event in the field of Computational Intelligence and its application to problems in biology, bioinformatics, computational biology, chemical informatics, bioengineering and related fields. The conference provides a global forum for academic and industrial scientists from a range of fields including computer science, biology, chemistry, medicine, mathematics, statistics, and engineering, to discuss and present their latest research findings from theory to applications.

The topics of interest for the special session include (but are not limited to):

  • Medical image classification
  • Medical image analysis
  • Expert systems for computer aided diagnosis and prognosis
  • Pattern recognition in the analysis of biomarkers for medical diagnosis
  • Deep learning in medical image processing and analysis
  • Ethical and Security issues in machine learning for medical diagnosis and prognosis

Up-to-date information and submission details can be found on the MLCIBCB web-page. The submission deadline is the 31st of March, 2017.

Please e-mail srostami@bournemouth.ac.uk with any questions.

Publish Open Access in Springer Journals for Free!

Open-Access-logoBU has an agreement with Springer which enables its authors to publish articles open access in one of the Springer Open Choice journals at no additional cost.

There are hundreds of titles included in this agreement, some of which are – Hydrobiologia, European Journal of Nutrition, Annals of Biomedical Engineering, Climatic Change, Marine Biology and the Journal of Business Ethics. A full list of the journals included can be found here

To make sure that your article is covered by this new agreement, when your article has been accepted for publication, Springer will ask you to confirm the following:

  • My article has been accepted by an Open Choice eligible journal
  • I am the corresponding author (please use your institutional email address not your personal one)
  • I am affiliated with an eligible UK institution (select your institutions name)
  • My article matches one of these types: OriginalPaper, ReviewPaper, BriefCommunication or ContinuingEducation

Springer will then verify these details with us and then your article will be made available in open access with a CC BY licence.

Please note that 30 Open Choice journals are not included in this agreement as they do not offer CC BY licensing.

If you have any questions about the agreement or the process, please contact OpenAccess@bournemouth.ac.uk

First 2017 publication by CMMPH academics

Yesterday saw the publication of the paper  ‘Antenatal care trial interventions: a systematic scoping review and taxonomy development of care models’, which is the first paper this year for the Centre for Midwifery, Maternal & Perinatal Health (CMMPH)  [1].    The paper is based on a cross-UK collaboration led by Dr. Andrew Symon from the University of Dundee which is published in the Open Access journal BMC Pregnancy & Childbirth.  This is the second paper from this collaboration, the first one ‘Midwifery-led antenatal care models: Mapping a systematic review to an evidence-based quality framework to identify key components & characteristics of care ‘ was published last year [2].

symon-taxonomy-2017The latest BMC Pregnancy & Childbirth paper is a first step in establishing a taxonomy of antenatal care models.  The article concludes that interventions can be defined and described in many ways. The intended antenatal care population group proved the simplest and most clinically relevant way of distinguishing trials which might otherwise be categorised together. Since our review excluded non-trial interventions, the taxonomy does not represent antenatal care provision worldwide. It offers a stable and reproducible approach to describing the purpose and content of models of antenatal care which have been tested in a trial. perhaps key is that the paper highlights a lack of reported detail of trial interventions and usual care processes.

Our paper provides a baseline for future work to examine and test the salient characteristics of the most effective models, and could also help decision-makers and service planners in planning implementation.

Moreover we look forward to conducting more research as part of this exciting collaboration in midwifery and maternity care.

 

Prof. Edwin van Teijlingen & Prof. Vanora Hundley

CMMPH

 

References:

  1. Symon, A., Pringle, J., Downe, S., Hundley, V., Lee, E., Lynn, F., McFadden, A., McNeill, J., Renfrew, M., Ross-Davie, M., van Teijlingen, E., Whitford, H., Alderdice, F. (2017) Antenatal care trial interventions: a systematic scoping review and taxonomy development of care models BMC Pregnancy & Childbirth 17:8 http://bmcpregnancychildbirth.biomedcentral.com/articles/10.1186/s12884-016-1186-3
  2. Symon, A., Pringle, J., Cheyne, H., Downe, S., Hundley, V., Lee, E., Lynn, F., McFadden, A., McNeill, J., Renfrew, M., Ross-Davie, M., van Teijlingen, E., Whitford, H, Alderdice, F. (2016) Midwifery-led antenatal care models: Mapping a systematic review to an evidence-based quality framework to identify key components & characteristics of care, BMC Pregnancy & Childbirth 16: 168 http://www.biomedcentral.com/1471-2393/16/168

New blog on Open Access publishing

authoraid-2016Some months ago Andy Nobes asked my colleague Prof. Padam Simkhada and I if we could write a blog about why we had so many papers in freely available online journals in Nepal.  Andy is the Programme Officer, Research Development & Support at INASP, which is an international development charity based in Oxford working with a global network of partners in Africa, Latin America and Asia.

We had a whole range of immediate answers to Andy’s question, including ones like: we both love Nepal; we are on the editorial board of a few journals that are part of the NepJOL group; and editors invite us to submit articles and/or editorials. Moreover, we feel reasons for Open Access publishing are very similar to our key reasons for working in a low-income country like Nepal. These principles are (a) conducting applied academic research in low-income countries for the greater good; (b) helping to build research-capacity; and (c) telling the world about our research through quality academic publications.  This week saw the publication of our blog ‘Publishing in journals of the NepJOL family’ on the AuthorAid website, click here to read the post.

Edwin van Teijlingen, Professor of Reproductive Health Research at Bournemouth University and Padam Simkhada, Professor of International Public Health at Liverpool John Moores University and BU Visiting Faculty.

Top three most accessed 2016 paper BMC Pregnancy & Childbirth

bmc-media-luce-et-alIt is always nice to receive some good news just before Christmas.  The journal BMC Pregnancy & Childbirth informed us that our paper ‘“Is it realistic?” the portrayal of pregnancy and childbirth in the media’ was in the top three most popular papers [1]This interdisciplinary paper crosses the boundaries between the study of maternity care & midwifery, sociology of health & illness, and that of the media.  With BU’s Dr. Ann Luce as first author, it is one of the top three accessed articles of nearly 400 articles published in 2016 (as of Dec 16th).     

 

Reference:

  1. Luce, A., Cash, M., Hundley, V., Cheyne, H., van Teijlingen, E., Angell, C., (2016) “Is it realistic?” the portrayal of pregnancy and childbirth in the media BMC Pregnancy & Childbirth 16: 40 http://bmcpregnancychildbirth.biomedcentral.com/articles/10.1186/s12884-016-0827-x

Publish Open Access in Springer Journals for Free!

Open-Access-logoBU has an agreement with Springer which enables its authors to publish articles open access in one of the Springer Open Choice journals at no additional cost.

There are hundreds of titles included in this agreement, some of which are – Hydrobiologia, European Journal of Nutrition, Annals of Biomedical Engineering, Climatic Change, Marine Biology and the Journal of Business Ethics. A full list of the journals included can be found here

To make sure that your article is covered by this new agreement, when your article has been accepted for publication, Springer will ask you to confirm the following:

  • My article has been accepted by an Open Choice eligible journal
  • I am the corresponding author (please use your institutional email address not your personal one)
  • I am affiliated with an eligible UK institution (select your institutions name)
  • My article matches one of these types: OriginalPaper, ReviewPaper, BriefCommunication or ContinuingEducation

Springer will then verify these details with us and then your article will be made available in open access with a CC BY licence.

Please note that 30 Open Choice journals are not included in this agreement as they do not offer CC BY licensing.

If you have any questions about the agreement or the process, please contact OpenAccess@bournemouth.ac.uk

Four new FHSS publications

bond-ahmed-2016

Congratulations to Dr. Carol Bond and Dr. Osman Ahmed in FHSS on the publication of their latest academic paper ‘Can I help you? Information sharing in online discussion forums by people living with a long-term condition’ [1].    Further congratulations are due to Osman who recently had three other papers accepted for publication [2-4].

 

Prof Edwin van Teijlingen

 

References:

  1.  Bond, C., Ahmed, O., 2016. Can I help you? Information sharing in online discussion forums by people living with a long-term condition. Journal of Innovation in Health Informatics, 23 (3).
  2. West L.R., Griffin , S., Weiler, R., Ahmed,O. 2016 Management of concussion in disability sport: a different ball game? British Journal of Sports Medicine doi:10.1136/bjsports-2016-096767
  3. “Educating the masses: Suggestions for improving online concussion information via the mainstream media” in Concussion (not available online yet)
  4. “Do Neurocognitive SCAT3 Baseline Test Scores Differ Between Footballers (Soccer) Living With and Without Disability? A Cross-Sectional Study” in Clinical Journal of Sports Medicine (not yet available online)

 

 

HSS staff achieve eHealth publication

Dr Carol Bond (Principal Academic Digital Health) and Dr Osman Ahmed (Lecturer in Physiotherapy) have recently had their work on online health information sharing published in the Journal of Innovation in Health Informatics.

Building upon their prior work on online communities, this study took a qualitative approach to explore the information shared by online discussion boards and how users shared this information. The study used diabetes forums as an exam, with key findings showing that much of the information sharing came from experience (including sharing their experiences from interactions with healthcare professionals). Drs Bond and Ahmed are now developing this work further by exploring similar patterns using other social media platforms (Twitter, Facebook, etc).

This paper is available online at:

https://hijournal.bcs.org/index.php/jhi/article/view/853

Bond, CS; Ahmed, OH. Can I help you? Information sharing in online discussion forums by people living with a long-term condition. Journal of Innovation in Health Informatics, 2016;23(3):620-626.

 

 

Publish Open Access in Springer Journals for Free!

Open-Access-logoBU has an agreement with Springer which enables its authors to publish articles open access in one of the Springer Open Choice journals at no additional cost.

There are hundreds of titles included in this agreement, some of which are – Hydrobiologia, European Journal of Nutrition, Annals of Biomedical Engineering, Climatic Change, Marine Biology and the Journal of Business Ethics. A full list of the journals included can be found here

To make sure that your article is covered by this new agreement, when your article has been accepted for publication, Springer will ask you to confirm the following:

  • My article has been accepted by an Open Choice eligible journal
  • I am the corresponding author (please use your institutional email address not your personal one)
  • I am affiliated with an eligible UK institution (select your institutions name)
  • My article matches one of these types: OriginalPaper, ReviewPaper, BriefCommunication or ContinuingEducation

Springer will then verify these details with us and then your article will be made available in open access with a CC BY licence.

Please note that 30 Open Choice journals are not included in this agreement as they do not offer CC BY licensing.

If you have any questions about the agreement or the process, please contact OpenAccess@bournemouth.ac.uk

Open Access in Horizon 2020

horizon 2020Open access to peer reviewed publications has been anchored as an underlying principle in the Horizon 2020 and is explained in the Regulation and the Rules of Participation. If you are a beneficiary or hoping to be a beneficiary of a Horizon 2020 grant, you need to be aware of your obligations to publish open access. Below are some of the key points taken from Horizon 2020 guidance which can be accessed in full here.

Are you supposed to deposit?

All Horizon 2020 beneficiaries are required to deposit and ensure open access.

What to deposit

  • A machine-readable electronic copy of the published version publisher’s final version of the paper, including all modifications from the peer review process, copyediting and stylistic edits, and formatting changes (usually a PDF document)

OR

  • A final peer-reviewed manuscript accepted for publication final manuscript of a peer-reviewed paper accepted for journal publication, including all modifications from the peer review process, but not yet formatted by the publisher (also referred to as “post-print” version).

Where to deposit

Researchers should deposit in a repository for publications of their choice. In order to manage and monitor open access compliance, BU request that all authors publish in our institutional repository (BURO) this can be done easily through BRIAN. Further information on how to do this can  be accessed here.

When to deposit

Each beneficiary must deposit as soon as possible. To comply with HEFCEs Open Access policy this should be on acceptance of the article.

Open-Access-logoWhen should Open Access be provided

Each beneficiary must ensure open access to the deposited publication — via the repository — at the latest: (i) on publication, if an electronic version is available for free via the publisher, or (ii) within six months of publication (twelve months for publications in the social sciences and humanities) in any other case.

For open access publishing, researchers can publish in open access journals, or in journals that sell subscriptions and also offer the possibility of making individual articles openly accessible (hybrid journals).  Where the case, the Author Processing Charges (APCs) incurred by beneficiaries are eligible for reimbursement during the duration of the action. For APCs incurred after the end of their grant agreement, a mechanism for paying some of these costs will be piloted. In the case of open access publishing open access must be granted at the latest on publication.

Beneficiaries must also ensure open access to the bibliographic metadata that identify the deposited publication. The bibliographic metadata must be in a standard format and must include all of the following:

  • the terms [“European Union (EU)” and “Horizon 2020”][“Euratom” and Euratom research and training programme 2014-2018″];
  • the name of the action, acronym and grant number;
  • the publication date, and length of embargo period if applicable, and
  • a persistent identifier.

In all cases, the Commission encourages authors to retain their copyright and grant adequate licences to publishers. Creative Commons offers useful licensing solutions in this regard (e.g. CC-BY, see Creative Commons Licenses).

In the context of the digital era, the notion of’ publication’ increasingly includes the data underpinning the publication and results presented, also referred to as ‘underlying’ data. Beneficiaries must aim to deposit at the same time the research data needed to validate the results presented in the deposited scientific publications, ideally into a data repository, and aim to make open access to this data. But there is no obligation to do so.

The first year student experience – ‘stay-at-home’ students

 

Colleagues,

A ‘hot-off-the-press’ publication exploring students experience living at home – maybe of interest to staff busy welcoming our new students, Debbie Holley

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Commuting, transitions and belonging: the experiences of students living at home in their first year at university (Pokorny, Holley, Kane)

In this study, our cross-case analysis of students’ lives challenges the conventional home–university model of transition and highlights the importance of acknowledging the influence of this complex symbiotic relationship for students who attend university and live at home. We argue that as with stay-at-home holidays, or “staycations”, which are of such crucial importance to the tourism industry, so stay-at-home students or commuter students are vital to higher education and the term utilised here is “stayeducation”. Through the narratives of “stayeducation” students, we see how family and community aspects of students’ lives are far more significant than previously realised, and our study suggests that these heavily influence the development of a student sense of belonging. Drawing upon biographical narrative method, this paper introduces three first-year Business and Economics students enrolled at different universities in London and explores their journeys through their transition through home, school and early university life. Ways in which key themes play out in the transition stories of our students and the challenges and obstacles for the individual are drawn out through the cross-case analysis. Findings support the existing literature around gender, class and identity; however, new insights into the importance, for these students, of family, friendships and community are presented. Our work has implications for academic staff, those writing institutional policies, and argues for the creation of different spaces within which students can integrate into their new environment.

This article is gold open access and can be accessed here:

http://link.springer.com/article/10.1007/s10734-016-0063-3