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Interdisciplinary Computational and Clinical Approaches at the Edge of Brain Research

We cordially invite you to the 3rd Symposium of the BU Interdisciplinary Neuroscience Research Centre on Wednesday, the 12th of June 2024, from 9:30-13:00 at the Inspire Lecture Theatre, Fusion Building (1st floor).

The symposium is entitled: “Interdisciplinary Computational and Clinical Approaches at the Edge of Brain Research”.

This third symposium revolves around contrasting computational and translational methodologies from a cross-disciplinary standpoint, leveraging synergies between BU and our collaborators in other universities and at the NHS. It is an opportunity for informal discussions on grant proposals and to explore shared interests with our external guests. The general schedule is as follows:

9:15. Welcome and coffee.

9:30. Keynote talk: Prof. Miguel Maravall, Sussex University.

10.20-10:40. Coffee and grants discussion.

10:40-11:40. Session I. Integrating Cognitive and Computational Neuroscience.

11.40 -12.00. Coffee and grants discussion.

12.00-13:00. Session II. Interdisciplinary Clinical Approaches & Concluding Remarks.

If you have any queries, please do not hesitate to contact Ellen Seiss, eseiss@bournemouth.ac.uk or Emili Balaguer-Ballester, eb-ballester@bournemouth.ac.uk.

Thank you very much, and we are looking forward to seeing you there.

Kind regards,

Ellen and Emili, on behalf of all of us.

 

 

 

 

New video summarises article on developing socio-emotional intelligence in doctoral students

Graphical abstract of the journal article available on the link

Graphical Abstract

Disseminating research in different mediums can be an effective way to reach wider audiences. Using video, illustrations and other types of graphic design and creative media can also bring research to life.

This new video summarises the paper in the Journal Encyclopedia titled “Developing the socio-emotional intelligence of doctoral students” by Principal academic at BU Dr Camila Devis-Rozental

It explores socio-emotional intelligence (SEI) within the context of doctoral supervision in the UK and it presents a variety of interventions that can be implemented throughout the doctoral journey to make a positive impact on the doctoral students’ SEI development and in supporting them to flourish and thrive in academia and beyond.

You can access the video Here

You can read the article Here

 

Article Processing Charges

Keywords: APC, Open access, REF, Repositories, Journals, Outputs.

APC and subscription-based models have their specific yet intersecting merits. Here in the UK, several aspects of publications have been repositioned during the last REF2021 census period. Lord Stern review led to several key changes, especially in terms of reporting research. Although the costs of APCs are high, HEIs have ringfenced QR funding to support outputs in quartile two and above through an internal review process. Similarly, publishers have institutional partnerships where partial or full waivers are offered. Several reputable publishers have introduced incentives to waive or partially waive APCs, for example, by contributing to the review process, participating as editors, and recommending high-quality manuscripts in terms of originality, significance, and academic depth.

APC route, for example, Creative Commons CC BY, offers many benefits to researchers, academics, and especially early career researchers in terms of flexibility of literature use as compared to traditional publication processes, such as the complexity and costs associated with permission to use or reuse infographics, including authors’ own results and images where copyright transfer has occurred. On the other hand, APCs provide an opportunity for wider availability of research to be read, used, and applied within research contexts where funding for subscription-based models is not generous or sometimes limited. Making preprint peer-reviewed and accepted author version manuscripts available on institutional repositories is a better alternative to APCs.

Traditional and legacy practices could benefit from dialogue and consideration; publishers’ subscription models could be diversified for greater inclusivity by offering variations in subscription fees based on certain metrics such as a country’s GDP or RPI. Revenues generated from both subscription and APCs should be more transparent, with figures available to public and open to stakeholders feedback. Profits should be reinvested in discounted subscription fees for HEIs, funding research through RC UK initiatives and similar programmes, and supporting early and mid-career researchers.

Another aspect which is not usually discussed is that traditionally, journals editorial teams, especially editors and chief editors, serve in their roles for prolonged periods. Although unintended, this inadvertently limits opportunities for diversity, inclusion, and equal opportunities for a diverse community of researchers worldwide. New thinking is needed to change the structure of publishers’ journal editorial teams to meet twenty-first-century needs. Some initial measures could include: (i) open calls for expressions of interest in editorial team roles, including editors and chief editors, (ii) transparent recruitment based on person specifications, and (iii) a maximum two-year tenure in the role. Subscription fees and APC revenue, combined with alternative grants from research councils and charities, could be used to incentivise engagement with the publishing process, from editorial board participation to contributing to the review process.

Zulfiqar A Khan
Professor of Design, Engineering & Computing
NanoCorr, Energy & Modelling (NCEM) Research Group Lead
Email: zkhan@bournemouth.ac.uk

RKEDF workshop: Introduction to BRIAN

Introduction to BRIAN – Monday 29th April, 10.00-11.00 Talbot campus

BRIAN (Bournemouth Research Information And Networking) is BU’s publication management system.

This introductory session is aimed at those who are new to BU, or have not updated their staff profile for a while. It will cover the basics of BRIAN, including how to use BRIAN to manage your research outputs, biography and research interests, professional activities and more.

By the end of the session, attendees will have an understanding of BRIAN and how it relates to Staff Profile Pages, how to create and update items and activities, how to claim/create/import publications, as well as how to upload full text articles to BURO (Bournemouth University Research Online).

Book your place here by selecting ‘Introduction to BRIAN – 29/04/24’ in the drop down menu.  Please note, attendees will need to bring their laptops.

For any queries regarding this workshop, please contact rkedf@bournemouth.ac.uk

See all RKEDF events

It’s only a name…

Yesterday my co-author Dr. Orlanda Harvey received an email from a sociology journal informing her that “The below co-author name is not matching with the separate title page provided and in the submission. If Van is the middle name please update the name in the author’s account.  Name in separate title page appears as Prof Edwin van Teijlingen….Name in site appears as vanTeijlingen, EdwinPlease address the above issue before resubmitting the manuscript.”

If you have an odd name in English you will have to get used to this kind of misunderstanding.  This is the second time this is happening when submitting a paper this month!   Interestingly with a different variant of my name.  A migration and health journal  argued to me co-author that my name on ORCID was ‘Edwin van Teijlingen’ but on Scopus ‘van Teijlingen, Edwin Roland’.  the journal then asked that we change it.

To add more example on the inflexibility of online systems, my greatest surprise a few years ago was that I could not add my Dutch family name ‘van Teijlingen’ with a small ‘v’ on the online booking web pages of the Dutch airline KLM.

What’s In A Name? A name is but a name, and to quote Shakespeare: A rose by any other name would smell as sweet.

 

New research paper published by PhD student Hina Tariq

PhD student Hina Tariq, currently undertaking the Clinical Academic Doctorate program at the Department of Social Sciences and Social Work (SSSW), published a new paper titled, “The Delphi of ORACLE: An Expert Consensus Survey for the Development of the Observational Risk Assessment of Contractures (Longitudinal Evaluation)” Open Access in the journal of Clinical Rehabilitation.
This paper is co-authored by her academic supervisors, Professor Sam Porter and Dr Kathryn Collins, her former academic supervisor, Dr Desiree Tait and her clinical supervisor, Joel Dunn (Dorset Healthcare University Foundation NHS Trust).

Summary: This paper used the Delphi method to provide expert consensus on items to be included in a contracture risk assessment tool (ORACLE). The items were related to factors associated with joint contractures, appropriate preventive care interventions, and potentially relevant contextual factors associated with care home settings. The promise of a risk assessment tool that includes these items has the capacity to reduce the risk of contracture development or progression and to trigger timely and appropriate referrals to help prevent further loss of function and independence.

The paper has already crossed over 250 reads. The full text can be accessed by following this link: The Delphi of ORACLE: An Expert Consensus Survey for the Development of the Observational Risk Assessment of Contractures (Longitudinal Evaluation)

 

Discovering Causal Relations and Equations from Data

Discovering equations, laws, or invariant principles underpins scientific and technical advancement. Robust model discovery has typically emerged from observing the world and, when possible, performing interventions to falsify models.

Recently, data-driven approaches like classic and deep machine learning are evolving traditional equation discovery methods. These new tools can provide unprecedented advances in computer science, neuroscience, physics, philosophy, and many applied areas.

We have just published a new study discussing concepts and methods on causal and equation discovery, outlining current challenges and promising future lines of research. The work also showcases comprehensive case studies in diverse scientific areas ranging from earth and environmental science to neuroscience.

Our tenet is that discovering fundamental laws and causal relations by observing natural phenomena is revolutionised with the coalescence of observational data and simulations, modern machine learning algorithms and domain knowledge. Exciting times are ahead with many challenges and opportunities to improve our understanding of complex systems.

This study is a collaborative work between eight universities in Europe and the United States (Valencia, Berlin, Tübingen, Jena, Stockholm, New York, and Bournemouth Universities).

Camps-Valls, G., Gerhardus, A., Ninad, U., Varando, G., Martius, G., Balaguer-Ballester, E., Vinuesa, R., Diaz, E., Zanna, L. and Runge, J., 2023. Discovering causal relations and equations from data. Physics Reports, 1044, 1-68 (Impact Factor=30).

 

RKEDF training opportunities coming up in December

We’re excited to share … 

some great RKEDF training opportunities coming up in December 

Please, click on the post titles to see details and book your place on to upcoming events.

By the end of the session, attendees will have an understanding of BRIAN and how it relates to Staff Profile Pages, how to create and update items and activities, how to claim/create/import publications, as well as how to upload full text articles to BURO (Bournemouth University Research Online). 


  • Online RSA Drop-In meeting Wednesday 6th  December, 10:30-11:00

Meet your RSA reps, hear updates on how BU is implementing the Research Concordat and give feedback or raise concerns that will help to develop and support the research community at BU


This session will provide an overview of the REF, it’s purpose and how it is carried out, as well as looking ahead to the next REF2028 assessment.


This is an opportunity to have a guided tour of the Konfer platform and its full functionality, enabling you to create and connect to the UK research collaborations with other universities and businesses.


By the end of this session, you will be familiar with the structure of an impact case study, what makes an excellent case study and what you will need in order to start building an impact case study from your own research.


By the end of this session, attendees will have a strong foundation of what to expect when being responsible for their awarded projects.


This session is aimed at all academics to provide an overview of the Research & Enterprise Database, including how to access the system, the information available to view, budget management via RED.

 

Please make sure you inform us in advance if you cannot attend an event that you have already booked onto, at RKEDF@bournemouth.ac.uk 

Introduction to BRIAN-BU’s publication management system

BRIAN (Bournemouth Research Information And Networking) is BU’s publication management system.

This introductory session is aimed at those who are new to BU, or have not updated their staff profile for a while. It will cover the basics of BRIAN, including how to use BRIAN to manage your research outputs, biography and research interests, professional activities and more.

By the end of the session, attendees will have an understanding of BRIAN and how it relates to Staff Profile Pages, how to create and update items and activities, how to claim/create/import publications, as well as how to upload full text articles to BURO (Bournemouth University Research Online).

Wednesday 6th December, 10:00 – 11:00 at Talbot Campus

To book onto this session, please complete the Booking Form under “Introduction to BRIAN – 06/12/2023”

 

For any queries regarding this workshop, please contact Claire Fenton, REF Manager, cfenton@bournemouth.ac.uk

 

Dr. Hongchuan Yu’s Research on Automated Tracing of Neurons Published in Nature Methods

Congratulations to Dr. Hongchuan Yu from NCCA for the recent publication of their manuscript titled “BigNeuron: a resource to benchmark and predict the performance of algorithms for automated tracing of neurons in light microscopy datasets” in Nature Methods. As a co-author, Dr. Yu and their team aimed to develop an open community bench-testing platform with the goal of setting open standards for accurate and fast automatic neuron tracing.

This research project was supported by the US National Institutes of Health (NIH) “The BRAIN Initiative” for over 7 years and was part of the “Brain Initiative Cell Census Network”. Dr. Yu’s group collaborated with Prof. Hanchuan Peng’s group at the Allen Institute for Brain Science (Seattle, US) on the development of neural tracing algorithms.

Currently, they are working together to develop informatics tools for analyzing, visualizing, and integrating data related to the BRAIN Initiative, with the goal of enhancing our understanding of the brain.

If you are interested in this paper, find it at: https://www.nature.com/articles/s41592-023-01848-5#Ack1

A New Publication by MSPH researcher on Combat Trauma and Heart Rate Variability in a UK Military Cohort

Rabeea Maqsood is a 2nd year PhD student based in the department of Medical Sciences and Public Health. As a part of her PhD, Rabeea’s original research has been published in BMJ Military Health. Read it #OpenAccess here:

https://militaryhealth.bmj.com/content/early/2023/03/28/military-2022-002316.citation-tools

This is the first study- to the authors’ knowledge- to have comprehensively explored the association between combat trauma (status, severity and mechanism) and ultra-short term HRV in a large sample of 862 participants.
 The co-authors on this paper (in no specific order) are Rabeea’ supervisors: Prof. Ahmed Khattab (MSPH, BU), Prof. Christopher Boos (Department of Cardiology, UHD) and collaborators from the ADVANCE study: Prof. Alex N Bennett (DMRC, Stanford Hall), Prof. Nicola Dear (King’s College London), Prof. Anthony Bull (Imperial College London), Prof. Paul Cullinan (Imperial College London) and Miss Susie Schofield (Imperial College London).